Expertises

  • Computer Science

    • Convolutional Neural Network
    • Detection
    • Positive Selection
    • Field Programmable Gate Arrays
    • Neural Network Architecture
    • Linkage
    • Algorithms
  • Biochemistry, Genetics and Molecular Biology

    • Selective Sweep

Organisaties

Publicaties

2025

Fast and accurate deep learning scans for signatures of natural selection in genomes using FASTER-NN (2025)Communications Biology, 8(1). Article 58. van den Belt, S. & Alachiotis, N.https://doi.org/10.1038/s42003-025-07480-7Methods for selective sweep detection using convolutional neural networks (2025)[Thesis › PhD Thesis - Research UT, graduation UT]. University of Twente. Zhao, H.https://doi.org/10.3990/1.9789036569484Accelerated Phylogenetics on the AMD Versal Adaptive SoC (2025)ACM Transactions on Reconfigurable Technology and Systems, 18(3). Article 41. Roks, G., Ruiz Noguera, M. & Alachiotis, N.https://doi.org/10.1145/3747592Information processing with silicon-based nonlinear computing units (2025)[Thesis › PhD Thesis - Research UT, graduation UT]. University of Twente. Zolfagharinejad, M.https://doi.org/10.3990/1.9789036568104Exploring the AMD®Deep Learning Processor Unit for Accelerating Selective Sweep Detection (2025)In Proceedings - 2025 IEEE International Parallel and Distributed Processing Symposium Workshops, IPDPSW 2025 (pp. 949-958). IEEE. Alachiotis, N. & Souilljee, M.https://doi.org/10.1109/IPDPSW66978.2025.00147FPGA innovation research in the Netherlands: present landscape and future outlook (2025)Frontiers in High Performance Computing, 3. Article 1572844. Alachiotis, N., van den Belt, S., van der Vlugt, S., van der Walle, R., Safari, M., Endres Forlin, B., De Matteis, T., Al-Ars, Z., Jordans, R., Sousa de Almeida, A. J., Corradi, F., Baaij, C. & Varbanescu, A.-L.https://doi.org/10.3389/fhpcp.2025.1572844Accelerated CNN-based Scans for Traces of Positive Selection (2025)In PASC 2025 - Platform for Advanced Scientific Computing Conference, Proceedings. Association for Computing Machinery. van den Belt, S. & Alachiotis, N.https://doi.org/10.1145/3732775.3733583Embedded test instruments for ageing-aware multi-processor system-on-chips (2025)[Thesis › PhD Thesis - Research UT, graduation UT]. University of Twente. Ali, G.https://doi.org/10.3990/1.9789036566193Applications of neural networks for FMCW automotive radars: Techniques for improving detection and DoA estimation (2025)[Thesis › PhD Thesis - Research UT, graduation UT]. University of Twente. Lima de Oliveira, M. L.https://doi.org/10.3990/1.9789036566018Accelerating Selective Sweep Detection using AMD Deep Learning Processing Units and Vitis AI (2025)In 45th Symposium on Information Theory and Signal Processing (SITB 2025) (pp. 8-11) (Accepted/In press). Bunda, S., Alachiotis, N. & Spreeuwers, L.

Onderzoeksprofielen

Vakken collegejaar 2025/2026

Vakken in het huidig collegejaar worden toegevoegd op het moment dat zij definitief zijn in het Osiris systeem. Daarom kan het zijn dat de lijst nog niet compleet is voor het gehele collegejaar.

Vakken collegejaar 2024/2025

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