Zilverling

dr.ir. N. Alachiotis (Nikolaos)

Universitair docent
EEMCS-CS-CAES
Zilverling 5035
n.alachiotis@utwente.nl
+31534891352
Visitekaartje

Expertises

  • Computer Science

    • Convolutional Neural Network
    • Detection
    • Positive Selection
    • Field Programmable Gate Arrays
    • Neural Network Architecture
    • Linkage
    • Algorithms

  • Biochemistry, Genetics and Molecular Biology

    • Selective Sweep

Organisaties

Publicaties

2024

Accelerated Spiking Convolutional Neural Networks for Scalable Population Genomics (2024)In Proceedings of the 14th International Symposium on Highly Efficient Accelerators and Reconfigurable Technologies, HEART 2024 (pp. 53-62) (ACM International Conference Proceeding Series). Association for Computing Machinery. Corradi, F., Shen, Z., Zhao, H. & Alachiotis, N.https://doi.org/10.1145/3665283.3665285Lightweight Instrumentation for Accurate Performance Monitoring in RTOSes (2024)In 2024 Design, Automation and Test in Europe Conference and Exhibition, DATE 2024 - Proceedings (Proceedings -Design, Automation and Test in Europe, DATE). IEEE. Forlin, B., Chen, K. H., Alachiotis, N., Cassano, L. & Ottavi, M.https://ieeexplore.ieee.org/document/10546790Accelerated Real-Time Classification of Evolving Data Streams using Adaptive Random Forests (2024)In 2023 International Conference on Field Programmable Technology (ICFPT) (pp. 232-237). Article 10416141. IEEE. Ridder, F., Chen, K.-H. & Alachiotis, N.https://doi.org/10.1109/ICFPT59805.2023.00031FPGA-accelerated Quantum Transport Measurements (2024)In 2023 International Conference on Field Programmable Technology (ICFPT) (pp. 44-52). IEEE. Haarman, T., Sousa de Almeida, A. J., Heskes, A., Zwanenburg, F. A. & Alachiotis, N.https://doi.org/10.1109/ICFPT59805.2023.00010

2023

Effective Data Preprocessing Techniques for CNN-based Selective Sweep Detection (2023)In 2023 IEEE International Conference on Bioinformatics and Biomedicine (BIBM) (pp. 793-800). Article 10385303 (IEEE International Conference on Bioinformatics and Biomedicine (BIBM); Vol. 2023). IEEE. Zhao, H. & Alachiotis, N.https://doi.org/10.1109/BIBM58861.2023.10385303Neutron Radiation Tests of the NEORV32 RISC-V SoC on Flash-Based FPGAs (2023)In 36th IEEE International Symposium on Defect and Fault Tolerance in VLSI and Nanotechnology Systems, DFT 2023 (Proceedings - IEEE International Symposium on Defect and Fault Tolerance in VLSI and Nanotechnology Systems, DFT; Vol. 36). IEEE. Böhmer, K., Forlin, B., Cazzaniga, C., Rech, P., Furano, G., Alachiotis, N. & Ottavi, M.https://doi.org/10.1109/DFT59622.2023.10313556SweepNet: A Lightweight CNN Architecture for the Classification of Adaptive Genomic Regions (2023)In PASC '23: Proceedings of the Platform for Advanced Scientific Computing Conference (pp. 1-10). Article 12. ACM Press. Zhao, H., Pavlidis, P. & Alachiotis, N.https://doi.org/10.1145/3592979.3593411A Survey of Processing Systems for Phylogenetics and Population Genetics (2023)ACM Transactions on Reconfigurable Technology and Systems, 16(3), 1-27. Corts, R. & Alachiotis, N.https://doi.org/10.1145/3588033Genome-wide scans for selective sweeps using convolutional neural networks (2023)Bioinformatics, 39(Supplement1), i194-i203. Zhao, H., Souilljee, M., Pavlidis, P. & Alachiotis, N.https://doi.org/10.1093/bioinformatics/btad265Selective sweeps identification in distinct groups of cultivated rye (Secale cereale L.) germplasm provides potential candidate genes for crop improvement (2023)[Dataset Types › Dataset]. Zenodo. Hawliczek, A., Borzęcka, E., Tofil, K., Alachiotis, N., Bolibok, L., Gawroński, P., Siekmann, D., Hackauf, B., Dušinský, R., Švec, M. & Bolibok-Bragoszewska, H.https://doi.org/10.5061/dryad.866t1g1vx

Onderzoeksprofielen

Vakken collegejaar 2024/2025

Vakken in het huidig collegejaar worden toegevoegd op het moment dat zij definitief zijn in het Osiris systeem. Daarom kan het zijn dat de lijst nog niet compleet is voor het gehele collegejaar.

Vakken collegejaar 2023/2024

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